euL1db
The European database of L1-HS retrotransposon insertions in humans

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Previous EXPORT


   Click to select columns
  • id
  • srip_id
  • study_id
  • integrity
  • chromosome
  • genomic_start
  • genomic_stop
  • genomic_strand
  • reference_start
  • reference_stop
  • pcr_results
  • class
  • family
  • sub_family
  • sub_group
  • tsd_del_size
  • tsd_del_sequence
  • inversion_detected
  • inversion_start
  • inversion_stop
  • polya_size
  • lineage
  • method_id
  • pcr_5_junction
  • pcr_3_junction
  • forward_primer
  • reverse_primer
  • allele_frequency
  • transduction_5p_detected
  • transduction_5p_coordinates
  • transduction_5p_source
  • transduction_3p_detected
  • transduction_3p_coordinates
  • transduction_3p_source
  • l1_activity
  • sample_id
  • gene_name
  • reference_l1hs
  • mrip_id
  • sequence
  • comments

196 SRIP in this sample from selected study
SRIP ID Chromosome Start Stop Strand Sub group Lineage PCR Reference SampleID GeneName
srip552 chr1 42483967 42483967 + unknown germline . no 234 HIVEP3
srip825 chr1 56405392 56405392 - unknown germline . no 234 LOC100507652
srip1811 chr1 75192898 75192898 - unknown germline . no 234 CRYZ
srip2091 chr1 84833982 84833982 + unknown germline . no 234 UOX
srip2810 chr1 101978986 101978986 - unknown germline . no 234 .
srip3060 chr1 102568916 102568916 + unknown germline . no 234 .
srip3189 chr1 105028221 105028221 + unknown germline . no 234 .
srip4117 chr1 149308428 149308428 + unknown germline . no 234 LOC645262
srip5053 chr1 169524865 169524865 + unknown germline . no 234 F5
srip5213 chr1 173803879 173803879 - unknown germline . no 234 DARS2
srip5423 chr1 179575369 179575369 - unknown germline . no 234 TDRD5
srip6960 chr1 223444360 223444360 + unknown germline . no 234 SUSD4
srip7186 chr1 234604822 234604822 . unknown germline . no 234 TARBP1
srip8013 chr10 19216659 19216659 + unknown germline . no 234 .
srip8387 chr10 25707684 25707684 - unknown germline . no 234 GPR158
srip8835 chr10 42797341 42797341 . unknown germline . no 234 .
srip9114 chr10 61787067 61787067 . unknown germline . no 234 ANK3
srip9796 chr10 82972200 82972200 + unknown germline . no 234 .
srip10811 chr10 107785204 107785204 . unknown germline . no 234 .
srip12559 chr11 15380252 15380252 . unknown germline . no 234 .
srip13818 chr11 33670130 33670130 + unknown germline . no 234 C11orf41
srip14245 chr11 41831803 41831803 - unknown germline . no 234 .
srip14727 chr11 48360744 48360744 - unknown germline . no 234 .
srip15378 chr11 58171843 58171843 + unknown germline . no 234 .
srip16464 chr11 82871374 82871374 . unknown germline . no 234 PCF11
srip17288 chr11 97067516 97067516 . unknown germline . no 234 .
srip17658 chr11 104556129 104556129 - unknown germline . no 234 .
srip18340 chr11 121131527 121131527 - unknown germline . no 234 .
srip19244 chr11 134305645 134305645 - unknown germline . no 234 .
srip19910 chr12 11219195 11219195 - unknown germline . no 234 PRH1-PRR4
srip20125 chr12 12933687 12933687 - unknown germline . no 234 APOLD1
srip20747 chr12 28226420 28226420 - unknown germline . no 234 .
srip21172 chr12 34017331 34017331 - unknown germline . no 234 .
srip21544 chr12 34348028 34348028 + unknown germline . no 234 .
srip22234 chr12 43256979 43256979 - unknown germline . no 234 .
srip22856 chr12 49106398 49106398 . unknown germline . no 234 CCNT1
srip22983 chr12 60183624 60183624 - unknown germline . no 234 .
srip24624 chr12 84965140 84965140 + unknown germline . no 234 .
srip25157 chr12 97015669 97015669 - unknown germline . no 234 C12orf55
srip27365 chr13 27488117 27488117 + unknown germline . no 234 .
srip27997 chr13 42771396 42771396 + unknown germline . no 234 DGKH
srip29078 chr13 61462340 61462340 - unknown germline . no 234 .
srip30331 chr13 72968678 72968678 + unknown germline . no 234 .
srip30967 chr13 79259790 79259790 - unknown germline . no 234 .
srip31573 chr13 85871607 85871607 - unknown germline . no 234 .
srip31997 chr13 86340151 86340151 - unknown germline . no 234 .
srip32483 chr13 92858409 92858409 . unknown germline . no 234 GPC5
srip33549 chr13 104296230 104296230 - unknown germline . no 234 .
srip35206 chr14 28301256 28301256 + unknown germline . no 234 .
srip35874 chr14 36674752 36674752 + unknown germline . no 234 .
srip36316 chr14 39875089 39875089 + unknown germline . no 234 FBXO33
srip37171 chr14 55267489 55267489 + unknown germline . no 234 .
srip37648 chr14 63348480 63348480 + unknown germline . no 234 KCNH5
srip38634 chr14 86381803 86381803 - unknown germline . no 234 .
srip39523 chr15 34031845 34031845 - unknown germline . no 234 RYR3
srip40228 chr15 47507335 47507335 - unknown germline . no 234 SEMA6D
srip42273 chr15 82501484 82501484 + unknown germline . no 234 EFTUD1
srip42535 chr15 83551628 83551628 - unknown germline . no 234 HOMER2
srip42610 chr15 85140901 85140901 + unknown germline . no 234 .
srip43252 chr15 100931152 100931152 - unknown germline . no 234 .
srip43429 chr16 436736 436736 . unknown germline . no 234 LOC100134368
srip43577 chr16 6793828 6793828 + unknown germline . no 234 RBFOX1
srip44029 chr16 14545725 14545725 . unknown germline . no 234 PARN
srip45507 chr16 33992437 33992437 . unknown germline . no 234 .
srip45986 chr16 67170470 67170470 - unknown germline . no 234 C16orf70
srip46332 chr16 71028016 71028016 + unknown germline . no 234 HYDIN
srip46397 chr16 76865778 76865778 . unknown germline . no 234 .
srip46824 chr17 15511186 15511186 + unknown germline . no 234 CDRT1
srip47022 chr17 25308311 25308311 . unknown germline . no 234 .
srip47711 chr17 32813627 32813627 . unknown germline . no 234 .
srip47929 chr17 40565601 40565601 . unknown germline . no 234 PTRF
srip47950 chr17 48971503 48971503 . unknown germline . no 234 .
srip48480 chr17 69159674 69159674 . unknown germline . no 234 .
srip48592 chr17 78204959 78204959 - unknown germline . no 234 SLC26A11
srip48600 chr18 21808 21808 + unknown germline . no 234 .
srip48982 chr18 15095255 15095255 - unknown germline . no 234 .
srip49443 chr18 28732910 28732910 - unknown germline . no 234 DSC1
srip50752 chr18 51762737 51762737 - unknown germline . no 234 .
srip51245 chr18 65349552 65349552 . unknown germline . no 234 LOC643542
srip52402 chr19 44450738 44450738 - unknown germline . no 234 .
srip52532 chr19 55510032 55510032 - unknown germline . no 234 NLRP2
srip52858 chr2 12063911 12063911 + unknown germline . no 234 .
srip53737 chr2 33141462 33141462 . unknown germline . no 234 LINC00486
srip54266 chr2 36570259 36570259 - unknown germline . no 234 .
srip56522 chr2 83188332 83188332 + unknown germline . no 234 .
srip56590 chr2 91624166 91624166 + unknown germline . no 234 .
srip56713 chr2 100310639 100310639 + unknown germline . no 234 AFF3
srip56868 chr2 106163161 106163161 + unknown germline . no 234 .
srip57848 chr2 133027000 133027000 . unknown germline . no 234 .
srip58239 chr2 141852915 141852915 - unknown germline . no 234 LRP1B
srip59191 chr2 147020925 147020925 + unknown germline . no 234 .
srip59616 chr2 156527835 156527835 + unknown germline . no 234 .
srip60160 chr2 178676252 178676252 - unknown germline . no 234 PDE11A
srip61655 chr2 213114168 213114168 + unknown germline . no 234 ERBB4
srip64037 chr20 25895497 25895497 - unknown germline . no 234 .
srip64057 chr20 25903871 25903871 - unknown germline . no 234 .
srip64508 chr20 29638578 29638578 . unknown germline . no 234 .
srip64774 chr20 41952105 41952105 - unknown germline . no 234 .
srip65854 chr21 19517305 19517305 - unknown germline . no 234 .
srip66937 chr21 29069180 29069180 . unknown germline . no 234 .
srip67144 chr22 17246060 17246060 + unknown germline . no 234 .
srip68750 chr22 44324597 44324597 - unknown germline . no 234 PNPLA3
srip71898 chr3 38626071 38626071 + unknown germline . no 234 SCN5A
srip72033 chr3 43262676 43262676 + unknown germline . no 234 .
srip72719 chr3 55788574 55788574 + unknown germline . no 234 ERC2
srip73923 chr3 75728590 75728590 - unknown germline . no 234 .
srip73942 chr3 76629516 76629516 - unknown germline . no 234 ROBO2
srip74447 chr3 80590169 80590169 - unknown germline . no 234 .
srip75285 chr3 84593281 84593281 - unknown germline . no 234 .
srip75578 chr3 85576556 85576556 + unknown germline . no 234 CADM2
srip77238 chr3 123590719 123590719 + unknown germline . no 234 MYLK
srip78641 chr3 151148548 151148548 - unknown germline . no 234 MED12L
srip80354 chr3 176091325 176091325 + unknown germline . no 234 .
srip80850 chr3 181192836 181192836 + unknown germline . no 234 .
srip82984 chr4 18162684 18162684 - unknown germline . no 234 .
srip83935 chr4 31036875 31036875 . unknown germline . no 234 PCDH7
srip84714 chr4 47007787 47007787 - unknown germline . no 234 .
srip86217 chr4 66413942 66413942 + unknown germline . no 234 EPHA5
srip87335 chr4 80768529 80768529 + unknown germline . no 234 GDEP
srip88900 chr4 103343750 103343750 + unknown germline . no 234 .
srip90348 chr4 115132699 115132699 + unknown germline . no 234 .
srip90713 chr4 118765257 118765257 + unknown germline . no 234 .
srip90742 chr4 119296359 119296359 - unknown germline . no 234 .
srip90802 chr4 120717537 120717537 - unknown germline . no 234 .
srip90894 chr4 124630700 124630700 . unknown germline . no 234 LOC285419
srip92196 chr4 134596423 134596423 + unknown germline . no 234 .
srip92272 chr4 135420704 135420704 + unknown germline . no 234 .
srip92900 chr4 142865881 142865881 - unknown germline . no 234 .
srip95415 chr4 190816411 190816411 . unknown germline . no 234 .
srip95444 chr4 190969819 190969819 + unknown germline . no 234 .
srip96793 chr5 17000295 17000295 . unknown germline . no 234 .
srip96891 chr5 21207723 21207723 + unknown germline . no 234 .
srip97231 chr5 26093147 26093147 + unknown germline . no 234 .
srip97741 chr5 33633341 33633341 - unknown germline . no 234 ADAMTS12
srip98655 chr5 49510776 49510776 . unknown germline . no 234 .
srip98662 chr5 51298596 51298596 . unknown germline . no 234 .
srip99514 chr5 68263468 68263468 - unknown germline . no 234 .
srip100741 chr5 89450775 89450775 + unknown germline . no 234 .
srip101083 chr5 96866415 96866415 + unknown germline . no 234 .
srip103354 chr5 125040043 125040043 + unknown germline . no 234 .
srip103780 chr5 137014782 137014782 - unknown germline . no 234 KLHL3
srip103891 chr5 137130153 137130153 - unknown germline . no 234 .
srip104857 chr5 154873935 154873935 - unknown germline . no 234 .
srip105250 chr5 155619871 155619871 + unknown germline . no 234 .
srip107526 chr6 13503042 13503042 + unknown germline . no 234 .
srip108290 chr6 45852704 45852704 - unknown germline . no 234 .
srip108703 chr6 46310298 46310298 + unknown germline . no 234 .
srip109140 chr6 57494221 57494221 . unknown germline . no 234 PRIM2
srip111059 chr6 77980645 77980645 - unknown germline . no 234 .
srip111281 chr6 78749401 78749401 + unknown germline . no 234 .
srip112046 chr6 91669514 91669514 - unknown germline . no 234 .
srip112713 chr6 102283764 102283764 - unknown germline . no 234 GRIK2
srip114429 chr6 148163578 148163578 + unknown germline . no 234 .
srip114765 chr6 148195798 148195798 + unknown germline . no 234 .
srip115703 chr6 162181267 162181267 + unknown germline . no 234 PARK2
srip116033 chr7 2407476 2407476 - unknown germline . no 234 EIF3B
srip116065 chr7 5787407 5787407 . unknown germline . no 234 RNF216
srip116623 chr7 27307051 27307051 . unknown germline . no 234 .
srip116884 chr7 41310791 41310791 - unknown germline . no 234 .
srip117628 chr7 53652509 53652509 - unknown germline . no 234 .
srip117992 chr7 61975096 61975096 . unknown germline . no 234 .
srip117996 chr7 61980463 61980463 + unknown germline . no 234 .
srip118294 chr7 62492938 62492938 + unknown germline . no 234 .
srip118508 chr7 66591179 66591179 - unknown germline . no 234 TYW1
srip118885 chr7 70188682 70188682 - unknown germline . no 234 AUTS2
srip119828 chr7 84901724 84901724 - unknown germline . no 234 .
srip121752 chr7 107829256 107829256 + unknown germline . no 234 NRCAM
srip122003 chr7 108325669 108325669 + unknown germline . no 234 .
srip122266 chr7 110484750 110484750 + unknown germline . no 234 IMMP2L
srip122605 chr7 121363007 121363007 - unknown germline . no 234 .
srip122979 chr7 128667629 128667629 + unknown germline . no 234 TNPO3
srip123333 chr7 142818659 142818659 + unknown germline . no 234 .
srip123809 chr8 3518066 3518066 . unknown germline . no 234 CSMD1
srip124063 chr8 4452901 4452901 - unknown germline . no 234 CSMD1
srip124398 chr8 5829282 5829282 - unknown germline . no 234 .
srip124850 chr8 12415247 12415247 + unknown germline . no 234 .
srip125816 chr8 43095212 43095212 + unknown germline . no 234 .
srip126442 chr8 62115151 62115151 + unknown germline . no 234 NPM1P6
srip128294 chr8 87315042 87315042 + unknown germline . no 234 .
srip128427 chr8 91446038 91446038 + unknown germline . no 234 .
srip129126 chr8 115788563 115788563 - unknown germline . no 234 .
srip129416 chr8 115881777 115881777 + unknown germline . no 234 .
srip130123 chr8 131041226 131041226 + unknown germline . no 234 .
srip131092 chr9 6290487 6290487 + unknown germline . no 234 .
srip132866 chr9 32092741 32092741 - unknown germline . no 234 .
srip133646 chr9 34904794 34904794 - unknown germline . no 234 .
srip133961 chr9 72777416 72777416 - unknown germline . no 234 LOC100507244;MAMDC2
srip134337 chr9 89891668 89891668 - unknown germline . no 234 .
srip135876 chr9 118083873 118083873 - unknown germline . no 234 DEC1
srip137235 chrX 54917144 54917144 + unknown germline . no 234 .
srip137349 chrX 55264659 55264659 - unknown germline . no 234 .
srip137563 chrX 55585152 55585152 - unknown germline . no 234 .
srip141053 chrX 122664864 122664864 - unknown germline . no 234 .
srip141378 chrX 129525275 129525275 - unknown germline . no 234 .
srip141977 chrX 140515265 140515265 - unknown germline . no 234 .
srip142274 chrY 13490336 13490336 + unknown germline . no 234 .